STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_0737530S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)    
Predicted Functional Partners:
EH30_01430
30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
EH30_05555
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
EH30_07245
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
EH30_07250
30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
EH30_07335
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
EH30_07910
30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
EH30_07915
30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
EH30_07950
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
EH30_07965
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
EH30_07970
30S ribosomal protein S14; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.999
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.