STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_09670Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (562 aa)    
Predicted Functional Partners:
EH30_09665
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
bchH
Involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
EH30_09800
SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.959
EH30_09780
Light-independent reduction of protochlorophyllide to form chlorophyllide a; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.926
EH30_09675
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.920
EH30_09760
Bacteriochlorophyll/chlorophyll synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.919
EH30_00055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.914
EH30_09700
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.908
EH30_09750
Geranylgeranyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.891
EH30_09785
Light-independent reduction of protochlorophyllide to form chlorophyllide a; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.886
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
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