STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_102552-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)    
Predicted Functional Partners:
EH30_10265
Ketoacid CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.906
EH30_10270
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.904
EH30_10250
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.876
EH30_10215
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.871
EH30_10260
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.870
EH30_10275
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.868
EH30_10245
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.863
EH30_10205
Steroid delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.854
EH30_10230
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.838
EH30_10220
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.835
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.