STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_11420Preprotein translocase subunit Tim44; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)    
Predicted Functional Partners:
EH30_11410
DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.934
EH30_11415
MltA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.889
EH30_15240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
EH30_15285
Disulfide bond formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
EH30_11425
Preprotein translocase subunit SecB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.718
EH30_06610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
EH30_10700
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.641
EH30_11575
Membrane protein insertase YidC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.633
EH30_11965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.628
EH30_12645
NADH dehydrogenase; Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.625
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.