STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH30_13540Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the rate-limiting step in dNTP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (672 aa)    
Predicted Functional Partners:
EH30_13510
Ribonucleotide-diphosphate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
EH30_07925
Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.966
ndk
Phosphodiesterase; Catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.966
EH30_10710
Guanylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.962
EH30_06130
Thymidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.955
EH30_06335
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.942
EH30_04065
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.940
EH30_07415
Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.930
EH30_11975
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.920
EH30_11445
Deoxyuridine 5'-triphosphate nucleotidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.909
Your Current Organism:
Erythrobacter sp. JL475
NCBI taxonomy Id: 383381
Other names: E. sp. JL475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.