STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2YG05_PSEFDUncharacterized protein. (95 aa)    
Predicted Functional Partners:
M2ZRV0_PSEFD
Uncharacterized protein.
 
  
   0.904
M3B7S2_PSEFD
Uncharacterized protein.
   
   0.594
N1Q6M8_PSEFD
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.544
M2YWI9_PSEFD
Ribosomal_L2_C domain-containing protein.
   
 
 0.530
N1Q6Q7_PSEFD
Ribosomal_L2_C domain-containing protein.
   
 
 0.492
M2ZEA9_PSEFD
CYTB_CTER domain-containing protein.
    
 
 0.472
M2ZE30_PSEFD
Uncharacterized protein.
   
   0.428
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.