STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2Z5W7_PSEFDUncharacterized protein. (356 aa)    
Predicted Functional Partners:
M3ANM8_PSEFD
Uncharacterized protein.
   
 0.543
M2Z9L2_PSEFD
Spindle pole body component.
    
 
 0.491
M2ZWN9_PSEFD
Spindle pole body component.
    
 
 0.490
M3AXJ6_PSEFD
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.488
N1Q9N1_PSEFD
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.482
M2Z2S2_PSEFD
Uncharacterized protein.
   
 0.471
M3AR51_PSEFD
Serine/threonine-protein kinase.
   
 0.419
M3A855_PSEFD
Protein kinase domain-containing protein.
    
 
 0.407
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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