STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2ZB66_PSEFDAminotran_5 domain-containing protein. (430 aa)    
Predicted Functional Partners:
M2ZQM8_PSEFD
NifU_N domain-containing protein.
  
 0.978
M3A2Q0_PSEFD
Uncharacterized protein.
     
 0.926
M2Z8V6_PSEFD
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.780
M3A509_PSEFD
Uncharacterized protein.
   
 0.780
M3AT34_PSEFD
Uncharacterized protein.
  
 0.739
N1Q8Y3_PSEFD
Nfu_N domain-containing protein.
  
 0.739
uba4
Adenylyltransferase and sulfurtransferase uba4; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers urm1 and MOCS2A. Its N-terminus first activates urm1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to urm1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...]
   
 0.733
M2YT45_PSEFD
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.707
M3AN35_PSEFD
Rhodanese domain-containing protein.
   
 0.705
N1QA27_PSEFD
Uncharacterized protein.
  
 0.688
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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