Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | M2ZAP2_PSEFD | N1Q5R7 | M2ZAP2 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.996 |
ERB1 | M2ZV34_PSEFD | N1Q5R7 | M2ZV34 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.998 |
ERB1 | M3A3A7_PSEFD | N1Q5R7 | M3A3A7 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.996 |
ERB1 | M3AQ74_PSEFD | N1Q5R7 | M3AQ74 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
ERB1 | M3AY11_PSEFD | N1Q5R7 | M3AY11 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.997 |
ERB1 | M3B3H7_PSEFD | N1Q5R7 | M3B3H7 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.995 |
ERB1 | M3B3J9_PSEFD | N1Q5R7 | M3B3J9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RRM domain-containing protein. | 0.989 |
ERB1 | N1Q6U0_PSEFD | N1Q5R7 | N1Q6U0 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CBF domain-containing protein. | 0.951 |
ERB1 | N1QCJ5_PSEFD | N1Q5R7 | N1QCJ5 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | GN3L_Grn1 domain-containing protein. | 0.999 |
ERB1 | NOP7 | N1Q5R7 | N1QBZ4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
M2ZAP2_PSEFD | ERB1 | M2ZAP2 | N1Q5R7 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.996 |
M2ZAP2_PSEFD | M2ZV34_PSEFD | M2ZAP2 | M2ZV34 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
M2ZAP2_PSEFD | M3A3A7_PSEFD | M2ZAP2 | M3A3A7 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.996 |
M2ZAP2_PSEFD | M3AQ74_PSEFD | M2ZAP2 | M3AQ74 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.994 |
M2ZAP2_PSEFD | M3AY11_PSEFD | M2ZAP2 | M3AY11 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.996 |
M2ZAP2_PSEFD | M3B3H7_PSEFD | M2ZAP2 | M3B3H7 | Uncharacterized protein. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.985 |
M2ZAP2_PSEFD | M3B3J9_PSEFD | M2ZAP2 | M3B3J9 | Uncharacterized protein. | RRM domain-containing protein. | 0.999 |
M2ZAP2_PSEFD | N1Q6U0_PSEFD | M2ZAP2 | N1Q6U0 | Uncharacterized protein. | CBF domain-containing protein. | 0.923 |
M2ZAP2_PSEFD | N1QCJ5_PSEFD | M2ZAP2 | N1QCJ5 | Uncharacterized protein. | GN3L_Grn1 domain-containing protein. | 0.997 |
M2ZAP2_PSEFD | NOP7 | M2ZAP2 | N1QBZ4 | Uncharacterized protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
page 1 of 6