STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3A645_PSEFDUncharacterized protein. (431 aa)    
Predicted Functional Partners:
M3AZ44_PSEFD
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.780
M3AH71_PSEFD
Uncharacterized protein.
    
 
 0.677
M3B9Y2_PSEFD
Uncharacterized protein.
    
 
 0.668
M2ZVK9_PSEFD
Sfi1 domain-containing protein.
  
  
 0.583
M3ALN2_PSEFD
Uncharacterized protein.
   
 
 0.527
M2ZS70_PSEFD
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
    0.504
M2YNE5_PSEFD
Uncharacterized protein.
   
 
 0.480
M3AP86_PSEFD
Uncharacterized protein.
   
 
 0.480
M2Z0T0_PSEFD
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.475
M2ZTW1_PSEFD
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.475
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.