STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3AA99_PSEFDCog4 domain-containing protein. (803 aa)    
Predicted Functional Partners:
M3A0S7_PSEFD
Uncharacterized protein.
    
 0.998
M2ZW91_PSEFD
Uncharacterized protein.
   
 0.997
M3AVJ9_PSEFD
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
  
 0.997
M3AYS3_PSEFD
COG2 domain-containing protein.
   
 0.995
M3A292_PSEFD
Uncharacterized protein.
    
 0.992
M3AQB3_PSEFD
t-SNARE coiled-coil homology domain-containing protein.
    
 0.879
M2YVY6_PSEFD
Uncharacterized protein.
    
 0.868
M3B5G5_PSEFD
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
     
 0.866
N1QD51_PSEFD
t-SNARE coiled-coil homology domain-containing protein.
     
 0.859
M2Z8I9_PSEFD
Uncharacterized protein.
   
 
 0.858
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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