STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3AAB3_PSEFDDNA primase; Belongs to the eukaryotic-type primase small subunit family. (450 aa)    
Predicted Functional Partners:
M3B7T7_PSEFD
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 0.999
N1Q7V3_PSEFD
DNA polymerase.
   
 0.999
N1QCD4_PSEFD
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
  
 0.999
M3ANZ3_PSEFD
AAA domain-containing protein.
   
 0.975
M2ZA56_PSEFD
DNA polymerase.
  
 0.973
M3ALS7_PSEFD
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.968
M2ZS58_PSEFD
DNA helicase; Belongs to the MCM family.
   
 0.967
MYCFIDRAFT_642
DNA helicase; Belongs to the MCM family.
  
 
 0.953
M3A8K3_PSEFD
DNA_pol_E_B domain-containing protein.
   
 
 0.944
M2ZHD0_PSEFD
Uncharacterized protein.
   
 0.941
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.