STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3AMD3_PSEFDRIO domain-containing protein. (336 aa)    
Predicted Functional Partners:
M2ZS70_PSEFD
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.999
M3AWG6_PSEFD
Uncharacterized protein.
   
 0.999
N1Q9C0_PSEFD
Bms1-type G domain-containing protein.
   
 0.999
M2ZMA8_PSEFD
KH domain-containing protein.
   
 0.998
N1Q735_PSEFD
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 0.998
N1QD15_PSEFD
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.998
M2YJK9_PSEFD
Ribosomal_S10 domain-containing protein.
   
 0.997
M2ZAH9_PSEFD
Uncharacterized protein.
   
 0.997
M3APT3_PSEFD
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
 0.996
M3B031_PSEFD
40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.
    
  0.996
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.