STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M3B6K5_PSEFDEpimerase domain-containing protein. (353 aa)    
Predicted Functional Partners:
N1Q8J1_PSEFD
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.709
N1Q735_PSEFD
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.708
N1Q773_PSEFD
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.708
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.707
M3B7L4_PSEFD
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.704
N1QAU4_PSEFD
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 0.704
N1Q9I2_PSEFD
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.702
M2YJK9_PSEFD
Ribosomal_S10 domain-containing protein.
   
  0.700
M3BA30_PSEFD
Uncharacterized protein.
   
 0.699
M2ZXA8_PSEFD
Uncharacterized protein.
   
 0.698
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.