STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N1Q5U0_PSEFDUncharacterized protein. (401 aa)    
Predicted Functional Partners:
M3APP5_PSEFD
ANK_REP_REGION domain-containing protein.
    
 
 0.983
N1QB48_PSEFD
Uncharacterized protein.
   
 
 0.956
N1Q7W9_PSEFD
Uncharacterized protein.
   
 0.953
N1QCN5_PSEFD
Matrin-type domain-containing protein.
   
 
 0.930
M3AMP3_PSEFD
Uncharacterized protein.
    
 
 0.896
M3A3V5_PSEFD
PSP domain-containing protein.
   
 
 0.885
M3BCC5_PSEFD
Uncharacterized protein.
    
 
 0.820
M3A4A7_PSEFD
CPSF_A domain-containing protein.
    
 
 0.785
N1Q5P2_PSEFD
Uncharacterized protein.
     
 0.783
M3AYR9_PSEFD
Uncharacterized protein.
    
 
 0.779
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.