STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N1QB27_PSEFDUncharacterized protein. (174 aa)    
Predicted Functional Partners:
M2ZTY5_PSEFD
Uncharacterized protein.
   
 0.997
M3ACY4_PSEFD
Signal peptidase subunit 3.
   
 0.994
M2YP30_PSEFD
Signal peptidase complex catalytic subunit SEC11.
   
 0.956
N1Q7E6_PSEFD
Signal peptidase complex catalytic subunit SEC11.
   
 0.956
M2YUF9_PSEFD
APH domain-containing protein.
   
 0.741
M3BBH1_PSEFD
Uncharacterized protein.
   
 0.741
N1Q6D4_PSEFD
APH domain-containing protein.
   
 0.741
N1QAQ1_PSEFD
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 
 0.663
M2YW02_PSEFD
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
      
 0.657
M3ANU0_PSEFD
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
   
  
 0.645
Your Current Organism:
Pseudocercospora fijiensis
NCBI taxonomy Id: 383855
Other names: Cercospora fijiensis CIRAD86, Mycosphaerella fijiensis CIRAD86, P. fijiensis CIRAD86, Pseudocercospora fijiensis CIRAD86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.