Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
M2ZTN1_PSEFD | M3AEA1_PSEFD | M2ZTN1 | M3AEA1 | Protein YOP1. | Reticulon-like protein. | 0.829 |
M2ZTN1_PSEFD | N1QBF6_PSEFD | M2ZTN1 | N1QBF6 | Protein YOP1. | Zinc_ribbon_10 domain-containing protein. | 0.501 |
M2ZTN1_PSEFD | SEY1 | M2ZTN1 | M3A3Z5 | Protein YOP1. | Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. | 0.864 |
M3AEA1_PSEFD | M2ZTN1_PSEFD | M3AEA1 | M2ZTN1 | Reticulon-like protein. | Protein YOP1. | 0.829 |
M3AEA1_PSEFD | N1QBF6_PSEFD | M3AEA1 | N1QBF6 | Reticulon-like protein. | Zinc_ribbon_10 domain-containing protein. | 0.635 |
M3AEA1_PSEFD | N1QBQ2_PSEFD | M3AEA1 | N1QBQ2 | Reticulon-like protein. | Protein YOP1. | 0.560 |
M3AEA1_PSEFD | SEY1 | M3AEA1 | M3A3Z5 | Reticulon-like protein. | Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. | 0.759 |
M3AV86_PSEFD | N1QBF6_PSEFD | M3AV86 | N1QBF6 | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | Zinc_ribbon_10 domain-containing protein. | 0.468 |
N1QBF6_PSEFD | M2ZTN1_PSEFD | N1QBF6 | M2ZTN1 | Zinc_ribbon_10 domain-containing protein. | Protein YOP1. | 0.501 |
N1QBF6_PSEFD | M3AEA1_PSEFD | N1QBF6 | M3AEA1 | Zinc_ribbon_10 domain-containing protein. | Reticulon-like protein. | 0.635 |
N1QBF6_PSEFD | M3AV86_PSEFD | N1QBF6 | M3AV86 | Zinc_ribbon_10 domain-containing protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.468 |
N1QBF6_PSEFD | N1QBQ2_PSEFD | N1QBF6 | N1QBQ2 | Zinc_ribbon_10 domain-containing protein. | Protein YOP1. | 0.488 |
N1QBF6_PSEFD | SEY1 | N1QBF6 | M3A3Z5 | Zinc_ribbon_10 domain-containing protein. | Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. | 0.590 |
N1QBQ2_PSEFD | M3AEA1_PSEFD | N1QBQ2 | M3AEA1 | Protein YOP1. | Reticulon-like protein. | 0.560 |
N1QBQ2_PSEFD | N1QBF6_PSEFD | N1QBQ2 | N1QBF6 | Protein YOP1. | Zinc_ribbon_10 domain-containing protein. | 0.488 |
SEY1 | M2ZTN1_PSEFD | M3A3Z5 | M2ZTN1 | Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. | Protein YOP1. | 0.864 |
SEY1 | M3AEA1_PSEFD | M3A3Z5 | M3AEA1 | Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. | Reticulon-like protein. | 0.759 |
SEY1 | N1QBF6_PSEFD | M3A3Z5 | N1QBF6 | Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily. | Zinc_ribbon_10 domain-containing protein. | 0.590 |