STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pisl_0141PFAM: glycosyl transferase, group 1; KEGG: pai:PAE0431 glycosyltransferase (type 1). (374 aa)    
Predicted Functional Partners:
Pisl_0140
KEGG: pai:PAE0432 hypothetical protein.
       0.791
Pisl_0139
KEGG: pai:PAE0433 hypothetical protein.
       0.604
Pisl_1505
PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: afu:AF0596 UDP-glucose dehydrogenase.
  
  
 0.602
Pisl_0971
PFAM: glycosyl transferase, group 1; KEGG: pai:PAE3422 starch phosphorylase.
  
 
 0.552
Pisl_1492
PFAM: glycosyl transferase, group 1; KEGG: ctc:CTC00268 mannosyltransferase.
  
     0.541
Pisl_1496
PFAM: glycosyl transferase, group 1; KEGG: mac:MA3757 mannosyltransferase B.
  
     0.466
Pisl_1494
PFAM: glycosyl transferase, family 2; KEGG: pai:PAE0439 dolichol-phosphate mannosyltransferase.
 
  
 0.457
Pisl_0427
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: pai:PAE3024 sugar-phosphate nucleotidyl transferase.
 
 
 0.441
Pisl_0138
PFAM: glycosyl transferase, family 2; KEGG: pai:PAE0437 glycosyltransferase (type 2).
 
  
 0.437
Pisl_1490
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: afu:AF0044m GDP-D-mannose dehydratase (gmd-1).
 
  
 0.426
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.