STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pisl_0200PFAM: Nickel-iron dehydrogenase small subunit, N-terminal domain protein; KEGG: fal:FRAAL2392 uptake hydrogenase small subunit precursor (hydrogenlyase) (membrane-bound hydrogenase small subunit). (438 aa)    
Predicted Functional Partners:
Pisl_0197
PFAM: nickel-dependent hydrogenase, large subunit; KEGG: sma:SAV7367 putative cytochrome C3-like hydrogenase (NiFeSe) large chain.
 
 0.999
Pisl_0196
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: aeh:Mlg_2026 hydrogenase expression/formation protein.
 
  
 0.922
Pisl_0170
KEGG: pai:PAE2571 sulfite reductase beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region.
     
 0.902
Pisl_0171
KEGG: pai:PAE2572 sulfite reductase alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
     
 0.902
Pisl_0207
TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: pab:PAB1560 hydrogenase expression/formation regulatory protein.
 
 
 
 0.902
Pisl_0205
PFAM: hydrogenase formation HypD protein; KEGG: tko:TK2000 hydrogenase expression/formation protein HypD.
 
  
 0.901
Pisl_0203
TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: mth:MTH205 hydrogenase expression/formation protein HypE.
 
   
 0.885
Pisl_0199
Hypothetical protein.
     
 0.870
Pisl_0669
KEGG: pai:PAE0718 succinate dehydrogenase cytochrome b subunit.
  
  
 0.812
Pisl_0202
Hypothetical protein.
     
 0.805
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.