Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pisl_0286PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE2891 spermidine/putrescine transport permease protein. (243 aa)    
Predicted Functional Partners:
Pisl_0287
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE2893 spermidine/putrescine transport permease protein.
 
 0.999
Pisl_1188
PFAM: extracellular solute-binding protein, family 1; KEGG: pai:PAE0953 putrescine/spermidine binding protein, conjectural.
 
 
 0.996
Pisl_0285
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pai:PAE2890 spermidine/putrescine transport ATP-binding protein.
 
 
 0.982
Pisl_0284
PFAM: Protein of unknown function DUF998; KEGG: pai:PAE2889 hypothetical protein.
       0.566
Pisl_0283
Hypothetical protein.
       0.556
Pisl_0077
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pai:PAE0063 transporter ATP-binding protein, putative.
 
     0.454
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
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