STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pisl_0366KEGG: pai:PAE2965 hypothetical protein. (141 aa)    
Predicted Functional Partners:
Pisl_0365
KEGG: pai:PAE2964 hypothetical protein.
       0.792
Pisl_0368
KEGG: pai:PAE2967 hypothetical protein.
       0.791
Pisl_0367
KEGG: pai:PAE2966 hypothetical protein.
       0.786
Pisl_0363
PFAM: protein of unknown function DUF309; KEGG: pai:PAE2960 hypothetical protein.
       0.713
Pisl_0364
PFAM: CBS domain containing protein; KEGG: pai:PAE2961 conserved protein with 2 CBS domains.
       0.707
Pisl_0369
paREP12; KEGG: pai:PAE1827 paREP12.
       0.402
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.