Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pisl_0912PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE3087 oligopeptide ABC transporter, permease protein. (356 aa)    
Predicted Functional Partners:
Pisl_0911
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE3086 oligopeptide ABC transporter, permease protein.
 0.999
Pisl_0563
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: pai:PAE3317 oligopeptide transport ATP-binding protein, putative; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase.
 
 0.998
Pisl_0603
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE2392 dipeptide transport permease.
 
 0.998
Pisl_0602
PFAM: extracellular solute-binding protein, family 5; KEGG: pai:PAE2391 dipeptide binding protein.
 
 0.996
Pisl_0562
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: pai:PAE3316 oligopeptide transport ATP-binding protein, putative; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase.
 
 0.993
Pisl_0913
TIGRFAM: LPXTG-motif cell wall anchor domain; KEGG: pai:PAE3088 oligopeptide binding protein, putative.
 
  
  0.988
Pisl_0604
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE2393 dipeptide transport permease.
  
  
 
0.920
rps13
SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.
  
    0.717
Pisl_0915
Pullulanase; KEGG: pai:PAE3090 pullulanase.
     
 0.646
Pisl_0908
Asparaginase; PFAM: peptidase T2, asparaginase 2; KEGG: pai:PAE3083 asparaginase.
  
  
 0.641
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
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