Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pisl_1502KEGG: gsu:GSU3024 hypothetical protein. (322 aa)    
Predicted Functional Partners:
Pisl_1499
PFAM: glycosyl transferase, group 1; KEGG: ccr:CC3173 glycosyl transferase, group 1 family protein.
 
     0.721
Pisl_1501
KEGG: pai:PAE0443 hypothetical protein.
       0.682
Pisl_1500
KEGG: pai:PAE0443 hypothetical protein.
       0.678
Pisl_1504
PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pfu:PF1357 UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase.
 
     0.599
Pisl_1492
PFAM: glycosyl transferase, group 1; KEGG: ctc:CTC00268 mannosyltransferase.
 
     0.553
Pisl_1490
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: afu:AF0044m GDP-D-mannose dehydratase (gmd-1).
       0.486
Pisl_1494
PFAM: glycosyl transferase, family 2; KEGG: pai:PAE0439 dolichol-phosphate mannosyltransferase.
       0.478
Pisl_1498
Hypothetical protein; KEGG: cac:CAC2403 predicted membrane protein.
       0.478
Pisl_1489
PFAM: Nucleotidyl transferase; KEGG: pai:PAE2968 sugar-phosphate nucleotidyl transferase, putative.
       0.476
Pisl_1491
TIGRFAM: methyltransferase FkbM family; KEGG: sso:SSO1623 hypothetical protein.
       0.476
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
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