STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pisl_1966SMART: AAA ATPase; KEGG: pai:PAE0320 P.aerophilum family 417, putative ATP binding. (380 aa)    
Predicted Functional Partners:
Pisl_1965
Dihydroorotase; PFAM: amidohydrolase; KEGG: pai:PAE0322 dihydroorotase (pyrC).
       0.791
Pisl_1967
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: pai:PAE0318 hypothetical protein.
       0.762
Pisl_0596
Putative circadian clock protein, KaiC; PFAM: KaiC domain protein; KEGG: pai:PAE3364 hypothetical protein.
 
     0.629
Pisl_0651
Putative circadian clock protein, KaiC; PFAM: KaiC domain protein; KEGG: pai:PAE0729 hypothetical protein.
  
     0.627
Pisl_0517
Putative circadian clock protein, KaiC; PFAM: KaiC domain protein; KEGG: pai:PAE3143 hypothetical protein; Belongs to the UPF0273 family.
  
     0.605
Pisl_1968
PFAM: GTP cyclohydrolase I; KEGG: pai:PAE0317 GTP cyclohydrolase I, conjectural.
       0.556
Pisl_1253
KEGG: pai:PAE1085 hypothetical protein.
  
     0.440
Pisl_1328
Putative circadian clock protein, KaiC; PFAM: KaiC domain protein; KEGG: pai:PAE1156 hypothetical protein.
  
     0.425
Pisl_2003
KEGG: pai:PAE0297 hypothetical protein.
  
     0.423
Pisl_1612
PFAM: FAD dependent oxidoreductase; KEGG: pai:PAE1543 hypothetical protein.
  
     0.411
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.