STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pisl_1973PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pai:PAE0176 metabolite transport protein. (417 aa)    
Predicted Functional Partners:
Pisl_1974
Transcriptional activator, TenA family; PFAM: TENA/THI-4 domain protein; KEGG: pai:PAE0170 conserved protein (tenA homolog).
 
    0.630
Pisl_1975
PFAM: TENA/THI-4 domain protein; KEGG: pai:PAE0171 hypothetical protein.
       0.559
Pisl_1976
PFAM: Protein of unknown function DUF1626; KEGG: sto:ST1761 hypothetical protein.
       0.514
Pisl_0055
Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: pai:PAE0556 amino acid permease; TC 2.A.3.
 
 
 0.449
Pisl_0127
PFAM: sodium/calcium exchanger membrane region; KEGG: pai:PAE0566 conserved within P.aerophilum.
 
  
 0.405
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.