STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pisl_1986PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rxy:Rxyl_1613 4Fe-4S ferredoxin, iron-sulfur binding protein. (282 aa)    
Predicted Functional Partners:
Pisl_1988
PFAM: molydopterin dinucleotide-binding region; KEGG: tdn:Tmden_0500 twin-arginine translocation pathway signal.
 
 
 0.973
Pisl_0266
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pai:PAE2840 molybdopterin oxidoreductase, molybdopterin binding subunit part 1, authentic frameshift.
 
 
 0.913
Pisl_1994
Formate dehydrogenase alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pai:PAE2662 formate dehydrogenase alpha subunit.
 
 
 0.899
Pisl_0162
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pai:PAE2859 molybdopterin oxidoreductase, molybdopterin binding subunit.
 
 0.869
Pisl_1822
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pai:PAE2002 molybdopterin oxidoreductase.
 
 
 0.797
Pisl_1987
KEGG: hdu:HD1111 formate dehydrogenase, gamma subunit.
       0.781
Pisl_1989
Hypothetical protein.
       0.773
Pisl_1990
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_2239 4Fe-4S ferredoxin, iron-sulfur binding protein.
       0.773
Pisl_1992
KEGG: pai:PAE2664 formate dehydrogenase delta subunit.
  
  
 0.730
Pisl_1997
KEGG: pai:PAE2659 formate dehydrogenase protein fdhE.
  
  
 0.696
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
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