STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pisl_2004PFAM: protein of unknown function DUF343; KEGG: pai:PAE0284 hypothetical protein. (140 aa)    
Predicted Functional Partners:
Pisl_2005
PFAM: protein of unknown function DUF134; KEGG: tko:TK0562 hypothetical protein.
 
     0.810
Pisl_1565
PFAM: Protein of unknown function DUF1512; KEGG: pai:PAE1446 hypothetical protein.
  
     0.716
Pisl_2003
KEGG: pai:PAE0297 hypothetical protein.
 
     0.707
Pisl_0816
PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: pai:PAE2180 DNA-directed DNA polymerase (B1).
 
     0.693
Pisl_2006
Hypothetical protein.
       0.658
Pisl_0347
KEGG: pai:PAE2941 hypothetical protein.
  
     0.633
Pisl_0820
KEGG: pai:PAE2169 ribosomal protein S26.
  
     0.611
Pisl_1653
KEGG: pai:PAE1625 putative serine/threonine protein kinase.
  
     0.599
Pisl_0859
KEGG: pai:PAE2224 hypothetical protein.
 
 
 0.577
Pisl_0711
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pai:PAE0656 hypothetical protein.
 
     0.552
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.