STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN0433Putative nucleotidyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (223 aa)    
Predicted Functional Partners:
PSEEN0432
Putative phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.995
PSEEN1501
Putative nucleoside-diphosphate-sugar epimerase WbjC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.926
murB
UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding; Cell wall formation.
    
  0.902
selB
selenocysteinyl-tRNA-specific translation factor; Function of homologous gene experimentally demonstrated in an other organism; factor.
    
 0.880
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.815
PSEEN0434
Putative DnaJ-like co-chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; molecular chaperone.
  
    0.811
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
    
 0.807
PSEEN4849
Putative transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.683
PSEEN2452
Putative lipopolysaccharide biosynthesis sugar transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.664
lptD
Putative organic solvent tolerance protein precursor OstA; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
     0.661
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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