STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN0553Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (173 aa)    
Predicted Functional Partners:
PSEEN0552
Hypothetical protein; No homology to any previously reported sequences.
       0.773
PSEEN0551
Hypothetical protein; No homology to any previously reported sequences.
       0.655
PSEEN0554
Hypothetical protein; No homology to any previously reported sequences.
       0.605
PSEEN0557
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    
0.544
PSEEN0550
Putative transposase (remnant); Gene remnant; enzyme.
       0.465
PSEEN3472
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.434
katG
Catalase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
    0.421
PSEEN0556
Hypothetical protein; No homology to any previously reported sequences.
       0.406
PSEEN1138
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.405
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.