Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN0616Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (270 aa)    
Predicted Functional Partners:
PSEEN0614
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.980
PSEEN0615
Conserved hypothetical protein RtcB; Homologs of previously reported genes of unknown function.
 
    0.946
PSEEN0410
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.797
rtcR
Sigma-54 dependent transcriptional regulator RtcR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
   
 0.776
PSEEN2248
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.551
PSEEN3597
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
     0.503
PSEEN0742
Conserved hypothetical protein; No homology to any previously reported sequences.
  
     0.495
creD
Tolerance to colicin E2; Function of strongly homologous gene; phenotype.
  
     0.495
PSEEN0741
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.488
creC
Two-component sensor CreC; Function of strongly homologous gene; regulator.
  
     0.451
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.