Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSEEN0618Putative FecR-like transmembrane sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (289 aa)    
Predicted Functional Partners:
PSEEN0619
Putative FecI-like RNA polymerase sigma-70 factor, ECF subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.927
PSEEN0620
Putative TonB-dependent receptor, Fe transport; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; receptor.
 
   
 0.827
PSEEN2531
Putative RNA polymerase sigma-70 factor, ECF subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.824
PSEEN4571
Putative RNA polymerase sigma-70 factor, ECF subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.824
PSEEN5131
Putative RNA polymerase sigma-70 factor, ECF subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.824
pfrI
Ferric regulator PfrI; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.823
PSEEN2499
Putative RNA polymerase sigma-70 factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.823
PSEEN3663
Putative RNA polymerase sigma-70 factor, ECF subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.823
PSEEN4331
Putative sigma-70 factor, ECF subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.821
PSEEN1037
Putative RNA polymerase sigma-70 factor, ECF family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.820
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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