Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
PSEEN0622Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (802 aa)    
Predicted Functional Partners:
PSEEN0621
Putative Long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase LuxE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.967
PSEEN0624
Putative acetyltransferase, GNAT family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.921
PSEEN0623
Putative AMP-dependent synthetase/ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
    
0.767
PSEEN2149
Putative non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     
 0.692
PSEEN3232
Putative pyoverdine sidechain peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.623
PSEEN2567
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.596
PSEEN2177
Putative surface colonization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype.
  
   
 0.574
PSEEN3315
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.546
hcnB
Hydrogene cyanide synthase HcnB; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.528
PSEEN2150
Putative non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     
 0.522
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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