STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
PSEEN0627Putative Zinc-dependent peptidase (M family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the MtfA family. (271 aa)    
Predicted Functional Partners:
PSEEN0628
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.934
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.744
PSEEN0630
Putative acetyltransferase, GNAT family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.651
eutC
Putative ethanolamine ammonia-lyase, light subunit EutC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the EutC family.
       0.616
eutB
Ethanolamine ammonia-lyase, heavy chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.616
nadA
Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.
      
 0.616
queE
Conserved hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
     
 0.583
queE-2
Putative radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
     
 0.583
mpl
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.
       0.492
PSEEN0625
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
       0.411
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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