STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN0628Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (215 aa)    
Predicted Functional Partners:
PSEEN0627
Putative Zinc-dependent peptidase (M family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the MtfA family.
  
  
 0.934
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.757
PSEEN0541
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
      
 0.618
PSEEN5274
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
      
 0.618
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
      
 0.596
PSEEN5338
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.517
PSEEN0630
Putative acetyltransferase, GNAT family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.511
eutC
Putative ethanolamine ammonia-lyase, light subunit EutC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the EutC family.
       0.465
macB2
Putative efflux ABC transporter, ATP-binding/permease protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
  
 0.465
PSEEN2275
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.456
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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