STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN0640Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (554 aa)    
Predicted Functional Partners:
PSEEN2176
Putative activation/secretion protein, TPS family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.630
PSEEN3180
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.591
PSEEN2177
Putative surface colonization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype.
 
 
 0.572
PSEEN3843
Putative exoprotein with autotransporter precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.565
PSEEN4310
Putative autotransporter protein with pertactin-type adhesion domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
    0.556
mpl
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.
       0.542
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.542
PSEEN0638
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.542
PSEEN0223
Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.531
PSEEN3028
Putative subtilisin-like serine protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.524
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.