STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cstACarbon starvation protein CstA; Function of homologous gene experimentally demonstrated in an other organism; phenotype. (688 aa)    
Predicted Functional Partners:
PSEEN0804
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.991
PSEEN0805
Putative cobalamin synthesis protein/P47K family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.784
PSEEN2957
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.522
PSEEN0802
Conserved hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein.
       0.521
PSEEN2481
Putative short-chain fatty acid transporter (scFAT family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.490
PSEEN1953
Putative ribose ABC transporter, ATP-binding protein RbsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
  
 0.474
PSEEN1954
Putative ribose ABC transporter, permease protein RbsC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
   
    0.456
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.