Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
PSEEN0937Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (498 aa)    
Predicted Functional Partners:
PSEEN3057
Putative phosphodiesterase (EAL domain); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.828
PSEEN0085
Putative signal transduction protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
   
 0.772
PSEEN5017
Putative sensory box protein/response regulator (hybrid); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
0.636
PSEEN2424
Putative sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.586
PSEEN1307
Putative sensory box-containing diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
0.549
PSEEN1461
Putative sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.541
PSEEN0807
Putative sensory box protein(GGDEF domain/EAL domain); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
0.540
PSEEN1480
Putative sensory box protein/GGDEF family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
0.540
PSEEN2310
Putative sensory box protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
0.539
gacS
GacS sensor kinase protein; Function experimentally demonstrated in the studied organism; enzyme.
 
 
 0.530
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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