Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN1027Putative hydrolase, carbon-nitrogen hydrolase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (263 aa)    
Predicted Functional Partners:
PSEEN1026
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.932
gdhA
Glutamate dehydrogenase, NADP-specific; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.925
gltB
Glutamate synthase [NADPH] large chain precursor (GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.924
PSEEN3954
Aminotransferase; Function of strongly homologous gene; enzyme.
  
 
 0.909
nadB
L-aspartate oxidase (quinolinate synthetase B); Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
 0.908
gltD
Glutamate synthase [NADPH] small chain (GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.905
phhC
Aromatic-amino-acid aminotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
  0.905
gdhB
NAD-specific glutamate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.903
icd
Isocitrate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
  0.837
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
 0.822
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
Server load: low (12%) [HD]