STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN1663Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (299 aa)    
Predicted Functional Partners:
PSEEN1662
Putative transcriptional regulator, AsnC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
   
 0.755
PSEEN1260
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
      
 0.618
PSEEN1664
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the methyltransferase superfamily.
       0.598
PSEEN3747
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
      
 0.592
PSEEN5014
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.494
PSEEN0673
Putative transcriptional regulator, ArsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
     0.483
PSEEN0407
Putative transcriptional regulator, AsnC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
   
 0.432
PSEEN2826
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.414
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.