STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN1726Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (572 aa)    
Predicted Functional Partners:
PSEEN1725
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.972
PSEEN1729
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.971
PSEEN1727
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.960
PSEEN1730
Putative ATPase, MoxR-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
   
 0.954
PSEEN1728
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.946
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.747
PSEEN2253
Hypothetical protein; No homology to any previously reported sequences.
   
 0.738
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
  
 0.736
rpoA
RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.630
rpoB
RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.597
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.