Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSEEN1900Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (178 aa)    
Predicted Functional Partners:
PSEEN1898
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.982
PSEEN1899
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.962
rimK
Ribosomal protein S6 modification protein; Function of homologous gene experimentally demonstrated in an other organism; structural protein.
 
   
 0.763
PSEEN1897
Putative para-aminodeoxychorismate synthase subunit I PabB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.708
PSEEN1901
Putative transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
       0.639
prpC
Methylcitrate synthase (citrate synthase 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the citrate synthase family.
       0.604
PSEEN1905
Putative aconitate hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.568
PSEEN1906
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.536
prpB
Methylisocitrate lyase PrpB; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
  
    0.529
PSEEN1896
Putative 5'-adenylylsulfate reductase, CysH; Reduction of activated sulfate into sulfite.
       0.465
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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