STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN2002Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (206 aa)    
Predicted Functional Partners:
PSEEN2003
Putative hydrolase, alpha/beta fold family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.839
PSEEN3231
Putative pyoverdine sidechain peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     
 0.621
PSEEN0839
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
   
 0.561
PSEEN3129
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.553
PSEEN2001
Putative acetyltransferase, GNAT family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
    0.541
PSEEN3340
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
   
 0.537
PSEEN2305
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
   
 0.520
PSEEN3330
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
   
 0.438
PSEEN2004
Putative multidrug efflux MFS membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
       0.431
PSEEN2005
Putative drug resistance transporter, EmrB/QacA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the major facilitator superfamily.
       0.431
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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