STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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PSEEN2005Putative drug resistance transporter, EmrB/QacA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the major facilitator superfamily. (502 aa)    
Predicted Functional Partners:
PSEEN2004
Putative multidrug efflux MFS membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.966
PSEEN2993
Putative HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.871
PSEEN2776
Putative multidrug resistance efflux pump, partial with no TM helices (HlyD family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.859
PSEEN4553
Putative multidrug efflux MFS membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.857
PSEEN1638
Putative HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; membrane component.
 
 
 0.856
PSEEN2708
Putative HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; membrane component.
 
 
 0.856
PSEEN1300
Putative efflux transporter, membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.629
PSEEN0155
Putative efflux transporter, membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.500
PSEEN4557
Putative HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; membrane component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.494
PSEEN2003
Putative hydrolase, alpha/beta fold family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.457
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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