Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSEEN2006Putative peptidase, M24 family (methionine aminopeptidase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (221 aa)    
Predicted Functional Partners:
PSEEN2007
Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
     
 0.650
PSEEN2010
Putative amidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
   0.526
PSEEN1327
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
     0.510
PSEEN2008
Putative L-serine dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.486
PSEEN2944
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.458
PSEEN2940
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.452
PSEEN2009
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.430
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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