Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSEEN2015Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (220 aa)    
Predicted Functional Partners:
PSEEN2014
Putative 4-hydroxyphenylpyruvate dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.895
PSEEN2945
Putative sulfatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
      
 0.620
mhbM
3-hydroxybenzoate-6-hydroxylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
   
 0.507
pobA
P-hydroxybenzoate hydroxylase (4-hydroxybenzoate 3-monooxygenase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
   
 0.427
aroE-2
Putative shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
     0.422
PSEEN2016
Hypothetical protein; No homology to any previously reported sequences.
       0.418
PSEEN2017
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
       0.418
PSEEN2018
Putative carbamoyltransferase, NodU family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.418
PSEEN2019
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.418
PSEEN2582
Putative arsenical pump (Ars family) (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.404
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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