Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PSEEN2017Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (205 aa)    
Predicted Functional Partners:
PSEEN2911
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
    0.788
PSEEN3129
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
    0.782
PSEEN2016
Hypothetical protein; No homology to any previously reported sequences.
       0.773
PSEEN2018
Putative carbamoyltransferase, NodU family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.773
PSEEN2019
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
PSEEN3370
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
    0.719
PSEEN3164
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.631
PSEEN2303
Putative transporter, LysE family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
   
 0.419
PSEEN2015
Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
       0.418
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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