STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qhnDHQuinohemoprotein amine dehydrogenase gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (107 aa)    
Predicted Functional Partners:
PSEEN2977
Quinohemoprotein amine dehydrogenase 60 kDa subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 
 0.985
PSEEN2974
Quinohemoprotein amine dehydrogenase 40 kDa subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
   0.978
PSEEN2976
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.954
PSEEN2818
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.843
PSEEN2817
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.787
PSEEN2819
Putative ABC efflux transporter, permease/ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.735
PSEEN3112
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.725
paaX
Transcriptional repressor for phenylacetic acid degradation; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
     0.635
PSEEN2854
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
   0.613
PSEEN2341
Hypothetical protein; No homology to any previously reported sequences.
 
 
   0.593
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.