STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN3152Putative ABC transporter, periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (638 aa)    
Predicted Functional Partners:
PSEEN3153
Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.957
PSEEN3154
Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.954
PSEEN3564
Putative ABC transporter, periplamic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 
0.915
PSEEN3565
Putative ABC transporter, periplamic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
  
 
0.904
PSEEN3567
Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.827
PSEEN3566
Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.819
PSEEN3568
Putative ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the ABC transporter superfamily.
 
  
 0.763
ppiC-2
Peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.751
dppB
Dipeptide ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
  
 0.523
PSEEN3155
Putative sigma-54 dependent transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
       0.506
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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