STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN3696Putative response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (394 aa)    
Predicted Functional Partners:
PSEEN3695
Putative anti-anti-sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.987
gacS
GacS sensor kinase protein; Function experimentally demonstrated in the studied organism; enzyme.
  
 0.896
PSEEN1461
Putative sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.842
PSEEN2424
Putative sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
 0.840
PSEEN3811
Putative anti-sigma F factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
 
 0.816
PSEEN3698
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.761
PSEEN0055
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.755
flgJ
Peptidoglycan hydrolase FlgJ; Function of strongly homologous gene; enzyme.
   
    0.743
PSEEN0892
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.740
PSEEN3809
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.736
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.