STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN3743Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (413 aa)    
Predicted Functional Partners:
PSEEN3742
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Function of strongly homologous gene; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.978
algA
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AlgA; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.948
PSEEN2949
Putative polysaccharide export protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.786
PSEEN2452
Putative lipopolysaccharide biosynthesis sugar transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.684
PSEEN4988
Putative lipopolysaccharide core biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.664
PSEEN2445
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.622
PSEEN2947
Putative exopolysaccharide transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.611
PSEEN1501
Putative nucleoside-diphosphate-sugar epimerase WbjC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.607
PSEEN2965
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 
 0.594
PSEEN2442
Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
  
 0.588
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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